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Ligand · LYD

LYD · 2-{4-[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)-ethyl]-benzoylamino}-3-methyl-butyric acid

LYD, 2-{4-[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)-ethyl]-benzoylamino}-3-methyl-butyric acid (C20 H23 N5 O4, 397.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
LYD
Formula
C20 H23 N5 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

LYD in 2 structures; the first of them:

  • 1JUT · E. coli Thymidylate Synthase Bound to dUMP and LY338529, A Pyrrolo(2,3-d)pyrimidine-based… · LYD A303 · binds LYS48, GLU58, ILE79, TRP80, TRP83, LEU143, ASP169, LEU172 and 6 more
  • 1JUT · E. COLI thymidylate synthase bound to dump and LY338529, a PYRROLO(2… · LYD A303 · binds LYS48, GLU58, ILE79, TRP80, TRP83, LEU143, ASP169, LEU172 and 6 more

Residues it binds most

ILE 4, LEU 4, TRP 4, ALA 4, ASP 4, GLU 4, GLY 4, LYS 4, PHE 4, TYR 4 (residue and the binding sites it lines).

Found with

  • UMP · 2'-deoxyuridine 5'-monophosphate

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