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Ligand · LSR

LSR · 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene

LSR, 1,3,3-trimethyl-2-[(1E,3E)-3-methylpenta-1,3-dien-1-yl]cyclohexene (C15 H24, 204.3 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
LSR
Formula
C15 H24
Class
ligand
Structures
8
PDB entries
4

Binding sites

LSR in 8 structures; the first of them:

  • 3CR6 · Crystal Structure of the R132K:R111L:A32E Mutant of Cellular Retinoic Acid Binding… · LSR A138 · binds PHE15, ALA36, SER37, PRO39, ILE52, THR54, THR61, ILE63 and 5 more
  • 3F8A · Crystal Structure of the R132K:R111L:L121E:R59W Mutant of Cellular Retinoic Acid-Binding… · LSR A139 · binds PHE15, ALA32, SER37, PRO39, THR54, THR56, TRP59, LYS132
  • 3F9D · Crystal structure of the R132K:R111L:T54E mutant of cellular retinoic acid-binding… · LSR A138 · binds PHE15, VAL41, ILE52, GLU54, GLU73, VAL76, TRP109, LEU121 and 3 more
  • 3FA6 · Crystal structure of the R132K:Y134F:R111L:L121D:T54V mutant of cellular retinoic… · LSR A138 · binds PHE15, ALA36, PRO39, VAL41, ILE52, VAL54, THR61, ILE63 and 6 more
  • 3CR6 · Crystal structure of the R132K:R111L:A32E mutant of cellular retinoic acid binding… · LSR A138 · binds PHE15, ALA36, SER37, PRO39, ILE52, THR54, THR61, ILE63 and 5 more
  • 3F8A · Crystal structure of the R132K:R111L:L121E:R59W mutant of cellular retinoic acid-binding… · LSR A139 · binds PHE15, ALA32, SER37, PRO39, THR54, THR56, TRP59, LYS132
  • 3F9D · Crystal structure of the R132K:R111L:T54E mutant of cellular retinoic acid-binding… · LSR A138 · binds PHE15, VAL41, ILE52, GLU54, GLU73, VAL76, TRP109, LEU121 and 3 more
  • 3FA6 · Crystal structure of the R132K:Y134F:R111L:L121D:T54V mutant of cellular retinoic… · LSR A138 · binds PHE15, ALA36, PRO39, VAL41, ILE52, VAL54, THR61, ILE63 and 6 more

Residues it binds most

ILE 10, VAL 8, LYS 12, PHE 12, TRP 12, GLU 8, LEU 10, MET 10, THR 6, PRO 8 (residue and the binding sites it lines).

Found with

  • B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol

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