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Ligand · LP8

LP8 · 3-cyclopentyl-1,4-dihydroxy-1,8-naphthyridin-2(1H)-one

LP8, 3-cyclopentyl-1,4-dihydroxy-1,8-naphthyridin-2(1H)-one (C13 H14 N2 O3, 246.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
LP8
Formula
C13 H14 N2 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

LP8 in 2 structures; the first of them:

  • 3LP1 · HIV-1 reverse transcriptase with inhibitor · LP8 A601 · binds ASP443, GLY444, GLU478, ASP498, SER499, ALA538, HIS539, ASP549
  • 3LP1 · HIV-1 reverse transcriptase with inhibitor · LP8 A601 · binds ASP443, GLY444, GLU478, ASP498, SER499, ALA538, HIS539, ASP549

Residues it binds most

ASP 2, ALA 2, GLU 2, GLY 2, HIS 2, SER 2 (residue and the binding sites it lines).

Found with

  • NVP · 11-cyclopropyl-5,11-dihydro-4-methyl-6H-dipyrido[3,2-B:2',3'-e][1,4]diazepin-6-one
  • MN · Manganese (II) ion

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