Ligand · LM5
LM5 · (3S,4R,5S)-N-benzyl-3,4-dihydroxy-5-methyl-D-prolinamide
LM5, (3S,4R,5S)-N-benzyl-3,4-dihydroxy-5-methyl-D-prolinamide (C13 H18 N2 O3, 250.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…
- Component
- LM5
- Formula
- C13 H18 N2 O3
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
LM5 in 4 structures; the first of them:
- 4JL1 · Crystal structure of a bacterial fucosidase with a multivalent iminocyclitol inhibitor · LM5 A501 · binds HIS66, GLU87, TRP88, HIS135, HIS136, TYR178, TRP227, ASP229 and 3 more
- 4JL2 · Crystal structure of a bacterial fucosidase with a monovalent iminocyclitol inhibitor · LM5 A501 · binds HIS66, GLU87, TRP88, HIS135, HIS136, TYR178, TRP227, ASP229 and 3 more
- 4JL1 · Crystal structure of a bacterial fucosidase with a multivalent iminocyclitol inhibitor · LM5 A501 · binds HIS66, GLU87, TRP88, HIS135, HIS136, TYR178, TRP227, ASP229 and 3 more
- 4JL2 · Crystal structure of a bacterial fucosidase with a monovalent iminocyclitol inhibitor · LM5 A501 · binds HIS66, GLU87, TRP88, HIS135, HIS136, TYR178, TRP227, ASP229 and 3 more
Residues it binds most
TRP 8, HIS 8, GLU 8, ASP 8, TYR 8, ARG 2 (residue and the binding sites it lines).
Found with
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