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Ligand · LKS

LKS · N-[(1Z)-2-phenylethanimidoyl]-5-thio-alpha-D-mannopyranosylamine

LKS, N-[(1Z)-2-phenylethanimidoyl]-5-thio-alpha-D-mannopyranosylamine (C14 H20 N2 O4 S, 312.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues…

Component
LKS
Formula
C14 H20 N2 O4 S
Class
sugar
Structures
2
PDB entries
1

Binding sites

LKS in 2 structures; the first of them:

  • 1R34 · Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamidinium salt · LKS A1102 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, SER268, TYR269 and 9 more
  • 1R34 · Golgi alpha-mannosidase II complex with 5-thio-D- mannopyranosylamidinium salt · LKS A1102 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, SER268, TYR269 and 9 more

Residues it binds most

ASP 2, ARG 2, HIS 2, TRP 2, TYR 2, PHE 2, SER 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • MPD · (4S)-2-methyl-2,4-pentanediol

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