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Ligand · LG4

LG4 · 5-methylpyridin-2-amine

LG4, 5-methylpyridin-2-amine (C6 H8 N2, 108.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
LG4
Formula
C6 H8 N2
Class
ligand
Structures
3
PDB entries
2

Binding sites

LG4 in 3 structures; the first of them:

  • 2EUP · Cytochrome c peroxidase (CCP) in complex with 2-amino-5-picoline · LG4 A400 · binds HIS175, LEU177, LYS179, THR180, GLY189, PRO190, GLY191, PHE202 and 4 more
  • 7H99 · Group deposition for crystallographic fragment screening of Chikungunya virus nsP3… · LG4 A207 · binds MET9, ASP10, ILE11, GLY32, VAL33, ALA36, TYR142, CYS143 and 1 more
  • 2EUP · Cytochrome C peroxidase (ccp) in complex with 2-amino-5-picoline · LG4 A400 · binds HIS175, LEU177, LYS179, THR180, GLY189, PRO190, GLY191, PHE202 and 4 more

Residues it binds most

GLY 4, MET 4, ASP 4, LEU 2, ALA 2, ARG 2, CYS 2, HIS 2, ILE 2, LYS 2 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • CL · Chloride ion
  • DMS · Dimethyl sulfoxide
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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