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Ligand · LDD

LDD · (azepan-1-yl)(4-methoxyphenyl)methanone

LDD, (azepan-1-yl)(4-methoxyphenyl)methanone (C14 H19 N O2, 233.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
LDD
Formula
C14 H19 N O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

LDD in 2 structures; the first of them:

  • 5QOP · PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with… · LDD A306 · binds VAL115, GLY117, LYS121, PHE126, LYS128, GLY129, LYS130, GLU148 and 1 more
  • 5QOP · Pandda analysis group deposition -- crystal structure of DCP2 (NUDT20) in complex with… · LDD A306 · binds VAL115, GLY117, LYS121, PHE126, LYS128, GLY129, LYS130, GLU148 and 1 more

Residues it binds most

LYS 2, GLY 2, GLN 2, GLU 2, PHE 2, VAL 2 (residue and the binding sites it lines).

Found with

  • ACT · Acetate ion
  • DMS · Dimethyl sulfoxide
  • EDO · 1,2-ethanediol

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