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Ligand · LC2

LC2 · N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-dihydroxy-1,4,10,19-tetramethyl-17,18-dioxo-16-oxabicyclo[13.2.2]nonadeca-3,5,9,11-tetraen-2-yl]-2-oxopropanamide

LC2, N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-dihydroxy-1,4,10,19-tetramethyl-17,18-dioxo-16-oxabicyclo[13.2.2]nonadeca-3,5,9,11-tetraen-2-yl]-2-oxopropanamide (C25 H33 N O7, 459.5 g/mol), in the MolNFT structures on GenesisL1: bound in…

Component
LC2
Formula
C25 H33 N O7
Class
ligand
Structures
4
PDB entries
2

Binding sites

LC2 in 4 structures; the first of them:

  • 3JQ4 · The structure of the complex of the large ribosomal subunit from D. Radiodurans with the… · LC2 A2881 · binds G2044, A2045, A2430, C2431, A2482, U2483, G2484, U2485 and 1 more
  • 3PIP · Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex… · LC2 X2881 · binds G2044, C2046, A2430, C2431, U2483, G2484, U2485, U2564
  • 3JQ4 · The structure of the complex of the large ribosomal subunit from D. radiodurans with the… · LC2 A2881 · binds G2044, A2045, A2430, C2431, A2482, U2483, G2484, U2485 and 1 more
  • 3PIP · Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex… · LC2 X2881 · binds G2044, C2046, A2430, C2431, U2483, G2484, U2485, U2564

Residues it binds most

U 4, A 4, G 4, C 4 (residue and the binding sites it lines).

Found with

  • LMA · Lankamycin
  • K · Potassium ion
  • MG · Magnesium ion
  • NA · Sodium ion

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