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Ligand · LB6

LB6 · N-[(6-bromo-1H-indol-1-yl)acetyl]glycine

LB6, N-[(6-bromo-1H-indol-1-yl)acetyl]glycine (C12 H11 Br N2 O3, 311.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
LB6
Formula
C12 H11 Br N2 O3
Class
ligand
Structures
6
PDB entries
3

Binding sites

LB6 in 6 structures; the first of them:

  • 7MCT · Crystal structure of Staphylococcus aureus Cystathionine gamma lyase, Holoenzyme with… · LB6 H401 · binds VAL98, GLY100, TYR103, ARG104, THR338, HIS339, ILE342, ILE346 and 2 more
  • 7MD6 · Crystal structure of Staphylococcus aureus cystathionine gamma lyase holoenzyme Y103N… · LB6 H401 · binds GLY100, ASN103, THR338, HIS339, SER341, ILE342, ILE346, GLU350 and 1 more
  • 7MDA · Crystal structure of Staphylococcus aureus cystathionine gamma lyase holoenzyme Y103A… · LB6 H401 · binds HIS12, SER54, SER55, SER58
  • 7MCT · Crystal structure of staphylococcus aureus cystathionine gamma lyase, holoenzyme with… · LB6 H401 · binds GLY100, TYR103, ARG104, THR338, HIS339, ILE342, ILE346, GLU350 and 1 more
  • 7MD6 · Crystal structure of staphylococcus aureus cystathionine gamma lyase holoenzyme Y103N… · LB6 H401 · binds GLY100, ASN103, THR338, HIS339, SER341, ILE342, GLU350
  • 7MDA · Crystal structure of staphylococcus aureus cystathionine gamma lyase holoenzyme Y103A… · LB6 H401 · binds HIS12

Residues it binds most

SER 13, HIS 15, ILE 7, LEU 7, THR 9, GLY 11, LYS 8, TYR 8, ASN 6, ARG 6 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • PLP · Pyridoxal-5'-phosphate
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
  • FLC · Citrate anion
  • GOL · Glycerol

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