GL1X · GenesisL1 explorer

Ligand · L7G

L7G · (5R,8S,11S)-5-methyl-8-(propan-2-yl)-11-[(1E)-4-sulfanylbut-1-en-1-yl]-3-thia-7,10,14,17,21-pentaazatricyclo[14.3.1.1~2,5~]henicosa-1(20),2(21),16,18-tetraene-6,9,13-trione

L7G, (5R,8S,11S)-5-methyl-8-(propan-2-yl)-11-[(1E)-4-sulfanylbut-1-en-1-yl]-3-thia-7,10,14,17,21-pentaazatricyclo[14.3.1.1~2,5~]henicosa-1(20),2(21),16,18-tetraene-6,9,13-trione (C23 H31 N5 O3 S2, 489.6 g/mol), in the MolNFT structures on…

Component
L7G
Formula
C23 H31 N5 O3 S2
Class
ligand
Structures
2
PDB entries
1

Binding sites

L7G in 2 structures; the first of them:

  • 4RN2 · Crystal structure of S39D HDAC8 in complex with a largazole analogue. · L7G A404 · binds HIS143, GLY151, PHE152, ASP178, HIS180, PHE208, ASP267, MET274 and 7 more
  • 4RN2 · Crystal structure of S39D HDAC8 in complex with a largazole analogue. · L7G A404 · binds HIS143, GLY151, PHE152, ASP178, HIS180, PHE208, ASP267, MET274 and 7 more

Residues it binds most

PHE 4, TYR 4, ASP 4, GLY 4, HIS 4, MET 4, LYS 4, PRO 4, LEU 2 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • ZN · Zinc ion

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