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Ligand · L53

L53 · 4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]-N-[(2S,3S)-3-hydroxy-1-nitroso-1-oxobutan-2-yl]benzamide

L53, 4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]-N-[(2S,3S)-3-hydroxy-1-nitroso-1-oxobutan-2-yl]benzamide (C21 H17 N3 O4, 375.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
L53
Formula
C21 H17 N3 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

L53 in 2 structures; the first of them:

  • 3PS3 · Crystal structure of the Escherichia Coli LPXC/LPC-053 complex · L53 A401 · binds LEU18, MET61, LEU62, CYS63, GLU78, HIS79, THR191, PHE192 and 13 more
  • 3PS3 · Crystal structure of the escherichia COLI LPXC/LPC-053 complex · L53 A401 · binds LEU18, MET61, LEU62, CYS63, GLU78, HIS79, THR191, PHE192 and 13 more

Residues it binds most

HIS 2, CYS 2, GLY 2, LEU 2, MET 2, PHE 2, ALA 2, ASP 2, GLN 2, GLU 2 (residue and the binding sites it lines).

Found with

  • UKW · 4-ethynyl-N-[(1S,2R)-2-hydroxy-1-(oxocarbamoyl)propyl]benzamide
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide

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