GL1X · GenesisL1 explorer

Ligand · KME

KME · (1E)-prop-1-en-1-yl 3-deoxy-7-O-methyl-alpha-D-manno-oct-2-ulopyranosidonic acid

KME, (1E)-prop-1-en-1-yl 3-deoxy-7-O-methyl-alpha-D-manno-oct-2-ulopyranosidonic acid (C12 H20 O8, 292.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
KME
Formula
C12 H20 O8
Class
sugar
Structures
2
PDB entries
1

Binding sites

KME in 2 structures; the first of them:

  • 3IKC · Structure of S67-27 in Complex with Kdo(2.8)-7-O-methyl-Kdo · KME E1 · binds ARG27F, TYR33, LYS53, ILE96, PRO98, TYR100C, GLU100E
  • 3IKC · Structure of S67-27 in complex with KDO(2.8)-7-O-methyl-kdo · KME E1 · binds ARG27F, TYR33, LYS53, ILE96, PRO98, TYR100C, GLU100E

Residues it binds most

TYR 4, ARG 4, LYS 4, PRO 4, GLU 2, ILE 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • KDO · 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.