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Ligand · JO3

JO3 · (2R)-2-methylbutanedioic acid

JO3, (2R)-2-methylbutanedioic acid (C5 H8 O4, 132.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
JO3
Formula
C5 H8 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

JO3 in 2 structures; the first of them:

  • 4UU7 · Crystal structure of zebrafish Sirtuin 5 in complex with 3-methyl- succinylated… · JO3 D1009 · binds ARG67, ALA82, TYR98, ARG101, ILE138, HIS154, VAL216, VAL217 and 3 more
  • 4UU7 · Crystal structure of zebrafish sirtuin 5 in complex with 3- methyl-succinylated… · JO3 D1009 · binds ARG67, ALA82, TYR98, ARG101, ILE138, HIS154, VAL216, VAL217 and 4 more

Residues it binds most

ARG 2, VAL 2, LYS 2, ALA 2, HIS 2, ILE 2, PHE 2, TRP 2, TYR 2 (residue and the binding sites it lines).

Found with

  • SUH · (2S)-2-methylbutanedioic acid
  • NA · Sodium ion
  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide
  • EDO · 1,2-ethanediol
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
  • BEZ · Benzoic acid

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