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Ligand · JM8

JM8 · N~5~-[(3-(ethylsulfanyl)propanimidoyl]-L-ornithine

JM8, N~5~-[(3-(ethylsulfanyl)propanimidoyl]-L-ornithine (C10 H21 N3 O2 S, 247.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
JM8
Formula
C10 H21 N3 O2 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

JM8 in 4 structures; the first of them:

  • 3JT4 · Structure of neuronal nitric oxide synthase heme domain complexed with… · JM8 A800 · binds GLN478, TRP561, TYR562, PRO565, VAL567, PHE584, SER585, GLY586 and 5 more
  • 3Q99 · Structure of neuronal nitric oxide synthase in the ferric state in complex with… · JM8 A800 · binds GLN478, TRP561, TYR562, PRO565, ALA566, VAL567, PHE584, SER585 and 7 more
  • 3JT4 · Structure of neuronal nitric oxide synthase heme domain complexed with… · JM8 A800 · binds GLN478, TRP561, TYR562, PRO565, VAL567, PHE584, SER585, GLY586 and 5 more
  • 3Q99 · Structure of neuronal nitric oxide synthase in the ferric state in complex with… · JM8 A800 · binds GLN478, TRP561, TYR562, PRO565, ALA566, VAL567, PHE584, SER585 and 7 more

Residues it binds most

TYR 8, TRP 8, ASP 8, GLN 8, GLU 8, GLY 8, MET 8, PHE 8, PRO 8, SER 8 (residue and the binding sites it lines).

Found with

  • H4B · 5,6,7,8-tetrahydrobiopterin
  • HEM · Protoporphyrin IX containing Fe
  • ZN · Zinc ion
  • ACT · Acetate ion

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