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Ligand · J1R

J1R · (1R,19R) cobalt tetradehydrocorrin

J1R, (1R,19R) cobalt tetradehydrocorrin (C33 H37 Co N4 O4 +1, 612.6 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
J1R
Formula
C33 H37 Co N4 O4 +1
Class
ligand
Structures
8
PDB entries
4

Binding sites

J1R in 8 structures; the first of them:

  • 3WFT · Crystal structure of horse heart myoglobin reconstituted with cobalt(II)… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 3WFU · Crystal structure of horse heart myoglobin reconstituted with cobalt(I) tetradehydrocorrin · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 5AZQ · Crystal structure of cyano-cobalt(III) tetradehydrocorrin in the heme pocket of horse… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 5AZR · Crystal structure of aqua-cobalt(III) tetradehydrocorrin in the heme pocket of horse… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 3WFT · Crystal structure of horse heart myoglobin reconstituted with COBALT(II)… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 3WFU · Crystal structure of horse heart myoglobin reconstituted with COBALT(I) tetradehydrocorrin · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 5AZQ · Crystal structure of cyano-COBALT(III) tetradehydrocorrin in the heme pocket of horse… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more
  • 5AZR · Crystal structure of aqua-COBALT(III) tetradehydrocorrin in the heme pocket of horse… · J1R A1001 · binds LEU32, LYS42, PHE43, LYS45, HIS64, VAL67, VAL68, ALA71 and 10 more

Residues it binds most

LEU 8, HIS 8, ILE 8, LYS 8, PHE 8, VAL 8, ALA 8, SER 8, TYR 8 (residue and the binding sites it lines).

Found with

  • J1S · (1S,19S) cobalt tetradehydrocorrin
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • CYN · Cyanide ion

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