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Ligand · J0M

J0M · D-galactonic acid

J0M, D-galactonic acid (C6 H12 O7, 196.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
J0M
Formula
C6 H12 O7
Class
ligand
Structures
3
PDB entries
2

Binding sites

J0M in 3 structures; the first of them:

  • 6E9O · E. coli D-galactonate:proton symporter mutant E133Q in the outward substrate-bound form · J0M B501 · binds TYR44, ARG47, TYR79, PHE137, THR161, GLN164, GLN264, VAL267 and 6 more
  • 8DE5 · Structure of glyceraldehyde-3-phosphate dehydrogenase from Paracoccidioides lutzii · J0M A402 · binds SER151, CSD152, THR153, THR154, THR177, HIS179, SER209, SER210 and 5 more
  • 6E9O · E. COLI D-GALACTONATE:PROTON symporter mutant E133Q in the outward substrate-bound form · J0M B501 · binds TYR44, ARG47, TYR79, PHE137, THR161, GLN164, GLN264, ALA268 and 4 more

Residues it binds most

THR 5, GLN 4, TYR 4, SER 5, ALA 5, ARG 5, TRP 3, ASN 4, PHE 4, LEU 3 (residue and the binding sites it lines).

Found with

  • NAD · Nicotinamide-adenine-dinucleotide
  • SO4 · Sulfate ion
  • GOL · Glycerol

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