Ligand · IPY
IPY · Imidazole-pyrrole polyamide
IPY, Imidazole-pyrrole polyamide (C31 H42 N11 O5 +1, 648.7 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- IPY
- Formula
- C31 H42 N11 O5 +1
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
IPY in 4 structures; the first of them:
- 1CVY · Crystal structure of polyamide dimer (IMPYPYPYBETADP)2 bound to ccagatctgg · IPY A12 · binds DG4, DA5, DT6, DC7, DT8, DG9, DG10, DA3 and 1 more
- 408D · Structural basis for recognition of a-T and T-a base pairs in the minor groove of B-DNA · IPY A22 · binds DG4, DT5, DA6, DC7, DT8, DG9, DG10, DC12 and 3 more
- 1CVY · Crystal structure of polyamide dimer (IMPYPYPYBETADP)2 bound to ccagatctgg · IPY A12 · binds DG4, DA5, DT6, DC7, DT8, DG9, DG10, DA3 and 1 more
- 408D · Structural basis for recognition of a-T and T-a base pairs in the minor groove of B-DNA · IPY A22 · binds DG4, DT5, DA6, DC7, DT8, DG9, DG10, DC12 and 3 more
Residues it binds most
DG 8, DA 8, DT 8, DC 8 (residue and the binding sites it lines).
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