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Ligand · IDM

IDM · Indoline

IDM, Indoline (C8 H9 N, 119.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
IDM
Formula
C8 H9 N
Class
ligand
Structures
3
PDB entries
2

Binding sites

IDM in 3 structures; the first of them:

  • 1AEK · Specificity of ligand binding to a buried polar cavity at the active site of cytochrome C… · IDM A296 · binds HIS175, LEU177, GLY178, LYS179, THR180, PRO190, GLY191, MET230 and 3 more
  • 3CEP · Structure of a tryptophan synthase quinonoid intermediate · IDM A270 · binds PHE22, GLU49, ALA59, ASP60, ILE64, LEU100, TYR102, LEU127 and 5 more
  • 1AEK · Specificity of ligand binding to a buried polar cavity at the active site of cytochrome C… · IDM A296 · binds HIS175, LEU177, GLY178, LYS179, THR180, PRO190, GLY191, MET230 and 3 more

Residues it binds most

GLY 3, LEU 4, MET 2, THR 4, ASP 3, HIS 3, LYS 3, PHE 2, ALA 1, GLU 2 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • G3P · Sn-glycerol-3-phosphate
  • MH6 · 3-hydroxy-2-iminopropanoic acid
  • PLP · Pyridoxal-5'-phosphate
  • CS · Cesium ion

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