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Ligand · HSL

HSL · Homoserine lactone

HSL, Homoserine lactone (C4 H7 N O2, 101.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HSL
Formula
C4 H7 N O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

HSL in 4 structures; the first of them:

  • 2BR6 · Crystal Structure of Quorum-Quenching N-Acyl Homoserine Lactone Lactonase · HSL A1255 · binds LEU16, ILE73, HIS106, PHE107, ASP108, HIS169, ASP191, TYR194 and 1 more
  • 5HJM · Crystal Structure of Pyrococcus abyssi Trm5a complexed with MTA · HSL A403 · binds VAL265, ASP266, LEU268, TYR281, ASP283, PHE293, ARG296
  • 2BR6 · Crystal structure of quorum-quenching N-acyl homoserine lactone lactonase · HSL A1255 · binds LEU16, ILE73, HIS106, PHE107, ASP108, HIS169, ASP191, TYR194 and 1 more
  • 5HJM · Crystal structure of pyrococcus abyssi TRM5A complexed with mta · HSL A403 · binds VAL265, ASP266, LEU268, TYR281, ASP283, PHE293, ARG296

Residues it binds most

ASP 4, HIS 2, LEU 4, PHE 4, TYR 4, ARG 2, ILE 2, VAL 2 (residue and the binding sites it lines).

Found with

  • MTA · 5'-deoxy-5'-methylthioadenosine
  • ZN · Zinc ion
  • ACT · Acetate ion
  • GOL · Glycerol

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