GL1X · GenesisL1 explorer

Ligand · HP1

HP1 · ~{N}-[5-[[5-[[5-[[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-4-oxidanyl-pyrrol-3-yl]-1-methyl-imidazole-2-carboxamide

HP1, ~{N}-[5-[[5-[[5-[[3-[3-(dimethylamino)propylamino]-3-oxidanylidene-propyl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-pyrrol-3-yl]carbamoyl]-1-methyl-4-oxidanyl-pyrrol-3-yl]-1-methyl-imidazole-2-carboxamide (C31 H41 N11 O6…

Component
HP1
Formula
C31 H41 N11 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

HP1 in 2 structures; the first of them:

  • 407D · Structural basis for recognition of a-T and T-a base pairs in the minor groove of B-DNA · HP1 A22 · binds DG4, DT5, DA6, DC7, DT8, DG9, DA13, DG14 and 1 more
  • 407D · Structural basis for recognition of a-T and T-a base pairs in the minor groove of B-DNA · HP1 A22 · binds DG4, DT5, DA6, DC7, DT8, DG9, DA13, DG14 and 1 more

Residues it binds most

DG 4, DA 4, DT 4, DC 4 (residue and the binding sites it lines).

Found with

  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.