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Ligand · HNB

HNB · (2S,5R)-5-pentyltetrahydrofuran-2-ol

HNB, (2S,5R)-5-pentyltetrahydrofuran-2-ol (C9 H18 O2, 158.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
HNB
Formula
C9 H18 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

HNB in 4 structures; the first of them:

  • 2K8T · Solution NMR structure of trans-4-hydroxy nal derived dG adduct of… · HNB A125 · binds DG7, DA8, DC18, DG19, DC20
  • 2K8U · Solution NMR structure of trans-4-hydroxy nal derived dG adduct of… · HNB A125 · binds DG7, DA8, DG9, DC18, DG19
  • 2K8T · Solution NMR structure of trans-4-hydroxynonenal derived dg adduct of… · HNB A125 · binds DG7, DA8, DC18, DG19, DC20
  • 2K8U · Solution NMR structure of trans-4-hydroxynonenal derived dg adduct of… · HNB A125 · binds DG7, DA8, DG9, DC18, DG19

Residues it binds most

DG 4, DC 4, DA 4 (residue and the binding sites it lines).

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