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Ligand · HE5

HE5 · Zinc(ii)-deuteroporphyrin dimethylester

HE5, Zinc(ii)-deuteroporphyrin dimethylester (C32 H34 N4 O4 Zn, 604.0 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
HE5
Formula
C32 H34 N4 O4 Zn
Class
ligand
Structures
4
PDB entries
2

Binding sites

HE5 in 4 structures; the first of them:

  • 2IN4 · Crystal Structure of Myoglobin with Charge Neutralized Heme, ZnDMb-dme · HE5 A201 · binds LEU32, LYS42, PHE43, LYS45, PHE46, HIS64, VAL67, VAL68 and 12 more
  • 3RJN · Horse heart myoglobin: D44K/D60K mutant with zinc (II) -deuteroporphyrin dimethyl ester · HE5 B201 · binds LEU32, LYS42, PHE43, LYS45, PHE46, HIS64, VAL67, VAL68 and 12 more
  • 2IN4 · Crystal structure of myoglobin with charge neutralized heme, zndmb-dme · HE5 A201 · binds LEU32, LYS42, PHE43, LYS45, PHE46, HIS64, VAL67, VAL68 and 12 more
  • 3RJN · Horse heart myoglobin: D44K/D60K mutant with zinc (II) - deuteroporphyrin dimethyl ester · HE5 B201 · binds LEU32, LYS42, PHE43, LYS45, PHE46, HIS64, VAL67, VAL68 and 12 more

Residues it binds most

LEU 4, HIS 4, PHE 4, ILE 4, LYS 4, VAL 4, ALA 4, PRO 4, SER 4, TYR 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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