GL1X · GenesisL1 explorer

Ligand · HDL

HDL · D-arabinohydroxamic acid

HDL, D-arabinohydroxamic acid (C5 H9 N O7, 195.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HDL
Formula
C5 H9 N O7
Class
sugar
Structures
2
PDB entries
1

Binding sites

HDL in 2 structures; the first of them:

  • 3HK8 · Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and… · HDL A428 · binds HIS26, HIS28, HIS49, TYR50, ARG170, SER223, MET258, ASP271 and 4 more
  • 3HK8 · Crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and… · HDL A428 · binds HIS26, HIS28, HIS49, TYR50, ARG170, SER223, MET258, ASP271 and 4 more

Residues it binds most

HIS 4, ARG 4, ASP 4, TRP 4, MET 4, SER 4, TYR 4 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • CL · Chloride ion
  • CO3 · Carbonate ion

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