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Ligand · HDE

HDE · Cis-heme D hydroxychlorin gamma-spirolactone 17R, 18S

HDE, Cis-heme D hydroxychlorin gamma-spirolactone 17R, 18S (C34 H38 Fe N4 O5, 638.5 g/mol), in the MolNFT structures on GenesisL1: bound in 20 records (10 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
HDE
Formula
C34 H38 Fe N4 O5
Class
ligand
Structures
20
PDB entries
10

Binding sites

HDE in 20 structures; the first of them:

  • 3P9P · Structure of I274V variant of E. coli KatE · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, GLY184, PHE185, ALA186 and 21 more
  • 3P9Q · Structure of I274C variant of E. coli KatE · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 21 more
  • 3P9S · Structure of I274A variant of E. coli KatE · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more
  • 3PQ2 · Structure of I274C variant of E. coli KatE[] - Images 1-6 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, GLY184, PHE185, ALA186 and 21 more
  • 3PQ3 · Structure of I274C variant of E. coli KatE[] - Images 7-12 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more
  • 3PQ4 · Structure of I274C variant of E. coli KatE[] - Images 13-18 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more
  • 3PQ5 · Structure of I274C variant of E. coli KatE[] - Images 19-24 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, GLY184, PHE185, ALA186 and 21 more
  • 3PQ6 · Structure of I274C variant of E. coli KatE[] - Images 25-30 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more
  • 3PQ7 · Structure of I274C variant of E. coli KatE[] - Images 31-36 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more
  • 3PQ8 · Structure of I274C variant of E. coli KatE[] - Images 37-42 · HDE A761 · binds ARG125, ILE126, VAL127, HIS128, ARG165, SER167, GLY184, PHE185 and 22 more

Residues it binds most

PHE 80, ARG 80, GLY 80, ALA 80, VAL 80, HIS 80, SER 80, ASN 80, ASP 80, GLN 80 (residue and the binding sites it lines).

Found with

  • HDD · Cis-heme D hydroxychlorin gamma-spirolactone
  • H2S · Hydrosulfuric acid
  • HEM · Protoporphyrin IX containing Fe

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