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Ligand · HCB

HCB · 5-hydroxybenzimidazolylcobamide

HCB, 5-hydroxybenzimidazolylcobamide (C60 H84 Co N13 O15 P +2, 1317.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
HCB
Formula
C60 H84 Co N13 O15 P +2
Class
ligand
Structures
3
PDB entries
2

Binding sites

HCB in 3 structures; the first of them:

  • 3EZX · Structure of Methanosarcina barkeri monomethylamine corrinoid protein · HCB A1 · binds MET48, GLY52, PHE55, GLU56, LEU62, ILE65, MET66, GLY69 and 28 more
  • 7XCN · Crystal structure of the MttB-MttC complex at 2.7 A resolution · HCB M301 · binds PHE109, GLY110, THR111, VAL113, SER154, ILE183, ASP184, LEU217 and 43 more
  • 3EZX · Structure of methanosarcina barkeri monomethylamine corrinoid protein · HCB A1 · binds MET48, GLY52, PHE55, GLU56, LEU62, ILE65, MET66, GLY69 and 28 more

Residues it binds most

GLY 8, MET 8, SER 8, ALA 8, ILE 8, LEU 8, THR 8, VAL 8, ASP 8, PHE 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GOL · Glycerol

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