Ligand · H6N

H6N · Protocatechuic aldehyde

H6N, Protocatechuic aldehyde (C7 H6 O3, 138.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: H6N
Formula: C7 H6 O3
Class: ligand
Structures: 5
PDB entries: 5

Binding sites

H6N in 5 structures; the first of them:

8XDP · O-methyltransferase from Lycoris longituba complexed with Mg, SAH, and… · H6N B501 · binds MET52, ALA53, ASP155, LYS158, ASP181, ASN182, TRP185, PHE186
8XDY · O-methyltransferase from Lycoris longituba M52A variant complexed with Mg, SAH, and… · H6N B503 · binds LYS13, ALA52, ALA53, ASP155, LYS158, ASP181, ASN182, TRP185 and 1 more
8XE2 · O-methyltransferase from Lycoris longituba D230A variant complexed with Mg, SAH, and… · H6N A605 · binds GLY-2, PRO-1, TYR8, LYS13, TRP50, MET52, ALA53, ASP155 and 4 more
9BTX · Structure of human MAIT A-F7 TCR in complex with human MR1-3,4-dihydroxybenzaldehyde · H6N A303 · binds TYR7, PHE8, ARG9, SER24, THR34, LYS43, TYR62, LEU66 and 3 more
6I73 · Structure of fragaria ananassa O-methyltransferase in complex with S… · H6N A402 · binds MET130, ASN131, PHE176, MET180, TRP266, HIS269, ASP270, MET316 and 3 more

Residues it binds most

MET 5, ASP 6, LYS 6, TRP 8, ASN 6, PHE 6, TYR 4, ALA 4, ARG 2, ILE 4 (residue and the binding sites it lines).

Found with

GOL · Glycerol
SAH · S-adenosyl-L-homocysteine
MG · Magnesium ion
NA · Sodium ion
SO4 · Sulfate ion
ACT · Acetate ion
EDO · 1,2-ethanediol
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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