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Ligand · GOO

GOO · (1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane-1,2,3-triol

GOO, (1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane-1,2,3-triol (C6 H13 N O4, 163.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
GOO
Formula
C6 H13 N O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

GOO in 2 structures; the first of them:

  • 3DX4 · Golgi alpha-Mannosidase II in complex with Mannostatin analog… · GOO A1049 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more
  • 3DX4 · Golgi alpha-mannosidase II in complex with mannostatin analog (1R,2R… · GOO A1049 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more

Residues it binds most

ASP 2, ARG 2, HIS 2, TRP 2, TYR 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • MRD · (4R)-2-methylpentane-2,4-diol

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