GL1X · GenesisL1 explorer

Ligand · GN3

GN3 · [[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-oxidanyl-2-[[oxidanyl(phosphonooxy)phosphoryl]oxymethyl]oxolan-3-yl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid

GN3, [[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-oxidanyl-2-[[oxidanyl(phosphonooxy)phosphoryl]oxymethyl]oxolan-3-yl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid (C10 H18 N6 O16 P4, 602.2 g/mol), in the…

Component
GN3
Formula
C10 H18 N6 O16 P4
Class
ligand
Structures
2
PDB entries
1

Binding sites

GN3 in 2 structures; the first of them:

  • 6S2U · Structure of the catalytic domain of T. thermophilus Rel in complex with AMP and ppGpp · GN3 A403 · binds ARG249, LYS251, SER255, LYS259, GLU263, ASP272, ARG277, ARG316 and 10 more
  • 6S2U · Structure of the catalytic domain of T. thermophilus rel in complex with AMP and ppgpp · GN3 A403 · binds ARG249, LYS251, LYS259, ASP272, ARG277, ARG316, LYS318, TYR320 and 8 more

Residues it binds most

ARG 2, LYS 2, TYR 2, GLU 2, ASN 2, ASP 2, GLN 2, HIS 2, SER 1 (residue and the binding sites it lines).

Found with

  • AMP · Adenosine monophosphate
  • TMO · trimethylamine oxide
  • MG · Magnesium ion
  • MN · Manganese (II) ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.