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Ligand · GEN

GEN · Genistein

GEN, Genistein (C15 H10 O5, 270.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
GEN
Formula
C15 H10 O5
Class
ligand
Structures
6
PDB entries
4

Binding sites

GEN in 6 structures; the first of them:

  • 5AV4 · Crystal structure of DAPK1-genistein complex in the presence of bromide ions. · GEN A400 · binds LEU19, GLY20, SER21, GLY22, ALA25, VAL27, ALA40, LYS42 and 8 more
  • 5KDA · Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4… · GEN A501 · binds GLY82, ILE167, GLU169, SER170, TYR268, LEU323, PRO324, ARG396 and 1 more
  • 6G8G · Flavonoid-responsive Regulator FrrA in complex with Genistein · GEN B1001 · binds PHE108, ARG176, PRO180, LEU181, PHE108, ASP113, VAL117, PRO139 and 3 more
  • 7NFB · ER-PRS*(+) (Y537S) in complex with genistein and SRC-2 coactivator peptide · GEN A601 · binds MET343, LEU346, THR347, LEU349, ALA350, GLU353, LEU384, LEU387 and 10 more
  • 5KDA · Crystal structure of the aromatic prenyltransferase atapt from aspergillus terreus A8-4… · GEN A501 · binds GLY82, ILE167, GLU169, SER170, ARG396, TRP397
  • 6G8G · Flavonoid-responsive regulator frra in complex with genistein · GEN B1001 · binds PHE108, PRO180, LEU181, PHE108, ASP113, VAL117, ARG176, PRO180

Residues it binds most

LEU 8, ARG 8, PRO 5, PHE 6, MET 3, GLY 6, ILE 5, VAL 5, ASP 5, GLU 5 (residue and the binding sites it lines).

Found with

  • DST · Dimethylallyl S-thiolodiphosphate
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid
  • NA · Sodium ion
  • BR · Bromide ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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