GL1X · GenesisL1 explorer

Ligand · GDO

GDO · 3'-deoxy-guanosine 5'-monophosphate

GDO, 3'-deoxy-guanosine 5'-monophosphate (C10 H14 N5 O7 P, 347.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
GDO
Formula
C10 H14 N5 O7 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

GDO in 4 structures; the first of them:

  • 4K99 · Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppdG(2 ,5 )pdG · GDO A605 · binds THR197, ASP213, MET215, SER291, PRO292, ALA293, ASP307, ILE309 and 6 more
  • 7LNF · 3'-deoxy modification at 3' end of RNA primer complex with guanosine dinucleotide ligand… · GDO A103 · binds C13, LCC104, LCG105
  • 4K99 · Structure of ternary complex of cgas with dsdna and bound 5 -PPPDG(2 , 5 )pdg · GDO A605 · binds THR197, ASP213, MET215, SER291, PRO292, ALA293, ASP307, ILE309 and 6 more
  • 7LNF · 3'-deoxy modification at 3' end of RNA primer complex with guanosine dinucleotide ligand… · GDO A103 · binds C13, LCC104, LCG105

Residues it binds most

SER 2, ASP 2, C 4, LCC 4, LCG 4, ALA 2, ARG 2, ILE 2, LEU 2, LYS 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GH3 · 3'-deoxy-guanosine-5'-triphosphate
  • GP3 · Diguanosine-5'-triphosphate
  • CO · Cobalt (II) ion
  • ZN · Zinc ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.