GL1X · GenesisL1 explorer

Ligand · GCT

GCT · 2,6-anhydro-3-deoxy-L-xylo-hexonic acid

GCT, 2,6-anhydro-3-deoxy-L-xylo-hexonic acid (C6 H10 O5, 162.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
GCT
Formula
C6 H10 O5
Class
sugar
Structures
6
PDB entries
3

Binding sites

GCT in 6 structures; the first of them:

  • 1RWF · Crystal structure of Arthrobacter aurescens chondroitin AC lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more
  • 1RWG · Crystal structure of Arthrobacter aurescens chondroitin AC lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more
  • 1RWH · Crystal structure of Arthrobacter aurescens chondroitin AC lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more
  • 1RWF · Crystal structure of arthrobacter aurescens chondroitin ac lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more
  • 1RWG · Crystal structure of arthrobacter aurescens chondroitin ac lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more
  • 1RWH · Crystal structure of arthrobacter aurescens chondroitin ac lyase in complex with… · GCT B2 · binds ASN124, TRP125, TRP126, ASN183, HIS233, TYR242, ARG296, ASN410 and 1 more

Residues it binds most

ASN 6, TRP 6, ARG 6, HIS 6, TYR 6 (residue and the binding sites it lines).

Found with

  • GAD · 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid
  • NA · Sodium ion
  • ASG · 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
  • PO4 · Phosphate ion
  • GOL · Glycerol

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