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Ligand · GBR

GBR · 5'-O-[(R)-{[(S)-[(R)-bromo(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine

GBR, 5'-O-[(R)-{[(S)-[(R)-bromo(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine (C11 H17 Br N5 O12 P3, 584.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
GBR
Formula
C11 H17 Br N5 O12 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

GBR in 2 structures; the first of them:

  • 3JPQ · Ternary complex of DNA polymerase beta with a dideoxy terminated primer and… · GBR A338 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more
  • 3JPQ · Ternary complex of DNA polymerase beta with a dideoxy terminated primer and… · GBR A338 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more

Residues it binds most

ARG 2, ASP 2, GLY 2, SER 2, ASN 2, DC 2, DG 2, DOC 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion

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