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Ligand · G1C

G1C · 5'-O-[(R)-{[(S)-[(S)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine

G1C, 5'-O-[(R)-{[(S)-[(S)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine (C11 H17 Cl N5 O12 P3, 539.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding…

Component
G1C
Formula
C11 H17 Cl N5 O12 P3
Class
ligand
Structures
4
PDB entries
2

Binding sites

G1C in 4 structures; the first of them:

  • 3JPO · Ternary complex of DNA polymerase beta with a dideoxy terminated primer and… · G1C A338 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more
  • 4DOC · Ternary complex of dna polymerase beta with a dideoxy terminated primer and… · G1C A410 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more
  • 3JPO · Ternary complex of DNA polymerase beta with a dideoxy terminated primer and… · G1C A338 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more
  • 4DOC · Ternary complex of DNA polymerase beta with a dideoxy terminated primer and… · G1C A410 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more

Residues it binds most

ARG 4, ASP 4, GLY 4, SER 4, ASN 4, DC 4, DG 4, DOC 4, PHE 4, THR 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion

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