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Ligand · FUD

FUD · D-fructose

FUD, D-fructose (C6 H12 O6, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
FUD
Formula
C6 H12 O6
Class
ligand
Structures
10
PDB entries
7

Binding sites

FUD in 10 structures; the first of them:

  • 7CJ5 · Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex… · FUD A302 · binds HIS12, ALA43, LEU45, SER69, LEU70, GLY71, GLY110, VAL111 and 10 more
  • 7CJ9 · Crystal structure of N-terminal His-tagged D-allulose 3-epimerase from Methylomonas sp.… · FUD A302 · binds HIS12, ALA43, LEU45, SER69, LEU70, GLY71, GLY110, VAL111 and 10 more
  • 7ERN · Crystal structure of D-allulose 3-epimerase with D-fructose from Agrobacterium sp. SUL3 · FUD A301 · binds HIS7, MET9, PRO38, SER64, LEU65, VAL66, GLY101, VAL102 and 8 more
  • 8IVP · Crystal structure of MV in complex with LLP and FRU from Mycobacterium vanbaalenii · FUD A401 · binds TYR74, VAL76, PHE129, ILE162, ALA164, LLP195, TRP199, GLY231 and 5 more
  • 8T24 · Crystal Structure of Porphyromonas gingivalis Sialidase (PG_0352)- Fructose bound in CBM · FUD A607 · binds HIS40, VAL94, ARG461, GLY484, SER485, GLY506, ASP507
  • 8XIV · Production of D-psicose · FUD A401 · binds TYR40, GLY99, ILE100, GLY101, GLY139, GLY140, TRP146, GLU184 and 8 more
  • 7CJ5 · Crystal structure of homo dimeric D-allulose 3-epimerase from methylomonas sp. in complex… · FUD A302 · binds HIS12, SER69, LEU70, GLY71, GLY110, VAL111, GLU152, GLU158 and 7 more
  • 7CJ9 · Crystal structure of N-terminal his-tagged D-allulose 3-epimerase from methylomonas sp.… · FUD A302 · binds HIS12, ALA43, SER69, LEU70, GLY71, GLY110, VAL111, GLU152 and 7 more
  • 7DZ3 · Crystal structures of D-allulose 3-epimerase with D-fructose from sinorhizobium fredii · FUD C301 · binds HIS9, PRO40, SER66, LEU67, GLY103, VAL104, ILE109, GLU146 and 8 more
  • 7ERN · Crystal structure of D-allulose 3-epimerase with D-fructose from agrobacterium sp. SUL3 · FUD A301 · binds HIS7, MET9, PRO38, SER64, LEU65, VAL66, GLY101, VAL102 and 8 more

Residues it binds most

GLU 31, HIS 32, LEU 31, VAL 35, GLY 30, ARG 34, ASP 32, SER 31, ALA 17, PHE 13 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • MN · Manganese (II) ion
  • BDF · beta-D-fructopyranose
  • EDO · 1,2-ethanediol
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
  • CO · Cobalt (II) ion
  • FLC · Citrate anion
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether
  • PGE · Triethylene glycol

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