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Ligand · EP6

EP6 · 5'-[{cis-3-[2-(5-tert-butyl-1H-benzimidazol-2-yl)ethyl]cyclobutyl}(propan-2-yl)amino]-5'-deoxyadenosine

EP6, 5'-[{cis-3-[2-(5-tert-butyl-1H-benzimidazol-2-yl)ethyl]cyclobutyl}(propan-2-yl)amino]-5'-deoxyadenosine (C30 H42 N8 O3, 562.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
EP6
Formula
C30 H42 N8 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

EP6 in 2 structures; the first of them:

  • 4HRA · Crystal Structure of DOT1L in Complex with EPZ-5676 · EP6 A501 · binds GLU129, LEU143, ASP161, LEU162, GLY163, SER164, GLY165, GLN168 and 18 more
  • 4HRA · Crystal structure of DOT1L in complex with epz-5676 · EP6 A501 · binds GLU129, LEU143, ASP161, LEU162, GLY163, SER164, GLY165, GLN168 and 18 more

Residues it binds most

VAL 2, GLY 2, LEU 2, PHE 2, SER 2, ASP 2, GLU 2, ALA 2, ASN 2, GLN 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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