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Ligand · EC5

EC5 · (2R)-2-[5-cyclopropyl-6-(hydroxysulfanyl)-4-(naphthalen-1-ylmethyl)-2-oxopyridin-1(2H)-yl]-3-phenylpropanoic acid

EC5, (2R)-2-[5-cyclopropyl-6-(hydroxysulfanyl)-4-(naphthalen-1-ylmethyl)-2-oxopyridin-1(2H)-yl]-3-phenylpropanoic acid (C28 H25 N O4 S, 471.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
EC5
Formula
C28 H25 N O4 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

EC5 in 2 structures; the first of them:

  • 2XG5 · E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor… · EC5 A1220 · binds PRO30, TYR31, LEU32, VAL56, GLN57, ARG58, ILE93, PRO94 and 2 more
  • 2XG5 · E. COLI P pilus chaperone-subunit complex papd-paph bound to pilus biogenesis inhibitor… · EC5 A1220 · binds PRO30, TYR31, LEU32, VAL56, GLN57, ARG58, ILE93, PRO94 and 2 more

Residues it binds most

PRO 2, ARG 2, GLN 2, ILE 2, LEU 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • EC2 · (2R,3R)-8-cyclopropyl-7-(naphthalen-1-ylmethyl)-5-oxo-2-phenyl-2,3-dihydro-5H-[1,3]thiazolo[3,2-a]pyridine-3-carboxylic acid
  • CO · Cobalt (II) ion
  • GOL · Glycerol
  • PGO · S-1,2-propanediol

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