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Ligand · DYM

DYM · (2R)-2,3-dihydroxypropyl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid

DYM, (2R)-2,3-dihydroxypropyl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid (C11 H17 N O8, 291.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
DYM
Formula
C11 H17 N O8
Class
sugar
Structures
2
PDB entries
1

Binding sites

DYM in 2 structures; the first of them:

  • 2F13 · Crystal Structure of the Human Sialidase Neu2 in Complex with 2',3'- dihydroxypropyl… · DYM A1001 · binds ARG21, ILE22, GLU39, ARG41, MET85, ASN86, TYR179, TYR181 and 6 more
  • 2F13 · Crystal structure of the human sialidase NEU2 in complex with 2',3'- dihydroxypropyl… · DYM A1001 · binds ARG21, ILE22, GLU39, ARG41, MET85, ASN86, TYR179, TYR181 and 6 more

Residues it binds most

ARG 2, TYR 2, GLU 2, ASN 2, ILE 2, LEU 2, MET 2 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion

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