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Ligand · DV6

DV6 · [(2S)-3-[(2S)-2-(disulfanyl)-2,3-dihydro-1H-imidazol-4-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]-trimethyl-azanium

DV6, [(2S)-3-[(2S)-2-(disulfanyl)-2,3-dihydro-1H-imidazol-4-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]-trimethyl-azanium (C9 H18 N3 O2 S2 +1, 264.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
DV6
Formula
C9 H18 N3 O2 S2 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

DV6 in 2 structures; the first of them:

  • 6KU2 · The structure of EanB/Y353A complex with ergothioneine covalent linked with persulfide… · DV6 A501 · binds TYR188, THR207, GLU211, TRP216, GLY256, TYR355, ALA374, TYR375 and 6 more
  • 6KU2 · The structure of EANB/Y353A complex with ergothioneine covalent linked with persulfide… · DV6 A501 · binds TYR188, GLU211, TRP216, GLY256, TYR355, ALA374, TYR375, CYS412 and 5 more

Residues it binds most

GLY 4, TYR 4, TRP 4, THR 4, ALA 4, ARG 4, CYS 4, GLU 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • BR · Bromide ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol
  • IMD · Imidazole
  • PEG · Di(hydroxyethyl)ether

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