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Ligand · DP1

DP1 · L-n(omega)-nitroarginine-2,4-L-diaminobutyric amide

DP1, L-n(omega)-nitroarginine-2,4-L-diaminobutyric amide (C10 H22 N8 O4, 318.3 g/mol), in the MolNFT structures on GenesisL1: bound in 9 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
DP1
Formula
C10 H22 N8 O4
Class
ligand
Structures
9
PDB entries
5

Binding sites

DP1 in 9 structures; the first of them:

  • 1P6H · Rat neuronal NOS heme domain with L-N(omega)-nitroarginine-2,4-L-diaminobutyric amide… · DP1 A790 · binds SER477, GLN478, ARG481, PRO565, VAL567, ASN569, PHE584, SER585 and 4 more
  • 1P6K · Rat neuronal NOS D597N mutant heme domain with… · DP1 A790 · binds MET336, SER477, GLN478, ARG481, PRO565, VAL567, ASN569, PHE584 and 7 more
  • 1P6L · Bovine endothelial NOS heme domain with L-N(omega)-nitroarginine-2,4-L-diaminobutyric… · DP1 A790 · binds VAL106, SER248, GLN249, ARG252, PRO336, VAL338, ASN340, PHE355 and 7 more
  • 1Q2O · Bovine endothelial nitric oxide synthase N368D mutant heme domain dimer with… · DP1 A790 · binds SER248, GLN249, ARG252, PRO336, VAL338, ASN340, PHE355, SER356 and 5 more
  • 1P6H · Rat neuronal nos heme domain with L-N(OMEGA)-nitroarginine- 2,4-L-diaminobutyric amide… · DP1 A790 · binds SER477, GLN478, ARG481, PRO565, VAL567, ASN569, PHE584, SER585 and 4 more
  • 1P6K · Rat neuronal nos D597N mutant heme domain with L-N(OMEGA)… · DP1 A790 · binds MET336, SER477, GLN478, ARG481, PRO565, VAL567, ASN569, PHE584 and 7 more
  • 1P6L · Bovine endothelial nos heme domain with L-N(OMEGA)-nitroarginine-2,4- L-diaminobutyric… · DP1 A790 · binds VAL106, SER248, GLN249, ARG252, PRO336, VAL338, ASN340, PHE355 and 7 more
  • 1Q2O · Bovine endothelial nitric oxide synthase N368D mutant heme domain dimer with… · DP1 A790 · binds SER248, GLN249, ARG252, PRO336, VAL338, ASN340, PHE355, SER356 and 5 more
  • 1ZZU · Rat nnos D597N/M336V double mutant with L-N(OMEGA)-nitroarginine-2,4- L-diaminobutyric… · DP1 A790 · binds VAL336, SER477, GLN478, ARG481, PRO565, VAL567, ASN569, PHE584 and 7 more

Residues it binds most

SER 18, TYR 18, TRP 18, VAL 18, ARG 18, ASN 18, GLN 18, GLU 18, GLY 18, PHE 18 (residue and the binding sites it lines).

Found with

  • H4B · 5,6,7,8-tetrahydrobiopterin
  • HEM · Protoporphyrin IX containing Fe
  • ZN · Zinc ion
  • ACT · Acetate ion
  • GOL · Glycerol
  • CAC · Cacodylate ion
  • MTL · D-mannitol

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