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Ligand · DNN

DNN · 7,8-diamino-nonanoic acid

DNN, 7,8-diamino-nonanoic acid (C9 H20 N2 O2, 188.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
DNN
Formula
C9 H20 N2 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

DNN in 4 structures; the first of them:

  • 1A82 · Dethiobiotin synthetase from escherichia COLI, complex with substrates ATP and… · DNN A801 · binds THR11, GLU12, SER41, PRO79, THR80, SER81, ALA117, GLY118 and 1 more
  • 1DAH · Dethiobiotin synthetase complexed with 7,8-diamino-nonanoic acid… · DNN A225 · binds THR11, GLU12, SER41, PRO79, THR80, SER81, PRO82, GLY118 and 1 more
  • 1A82 · Dethiobiotin synthetase from escherichia COLI, complex with substrates ATP and… · DNN A801 · binds THR11, GLU12, SER41, PRO79, THR80, SER81, ALA117, GLY118 and 1 more
  • 1DAH · Dethiobiotin synthetase complexed with 7,8-diamino-nonanoic acid… · DNN A225 · binds THR11, GLU12, SER41, PRO79, THR80, SER81, PRO82, GLY118 and 1 more

Residues it binds most

THR 4, SER 4, PRO 4, GLU 4, GLY 4, ALA 2 (residue and the binding sites it lines).

Found with

  • ACP · Phosphomethylphosphonic acid adenylate ester
  • ATP · Adenosine-5'-triphosphate
  • MG · Magnesium ion
  • MN · Manganese (II) ion

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