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Ligand · DMI

DMI · 2,3-dimethylimidazolium ion

DMI, 2,3-dimethylimidazolium ion (C5 H9 N2 +1, 97.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
DMI
Formula
C5 H9 N2 +1
Class
ligand
Structures
5
PDB entries
3

Binding sites

DMI in 5 structures; the first of them:

  • 1CCI · How flexible are proteins? trapping of a flexible loop · DMI A499 · binds HIS175, LEU177, GLY178, LYS179, THR180, PRO190, MET230, MET231 and 2 more
  • 1CMP · Small molecule binding to an artificially created cavity at the active site of cytochrome… · DMI A295 · binds HIS175, LEU177, GLY178, LYS179, THR180, GLY189, PRO190, GLY191 and 4 more
  • 4REV · Structure of the dirigent protein DRR206 · DMI B202 · binds GLU182, CYS183, TRP184
  • 1CCI · How flexible are proteins? trapping of a flexible loop · DMI A499 · binds HIS175, LEU177, GLY178, LYS179, THR180, PRO190, MET230, MET231 and 2 more
  • 1CMP · Small molecule binding to an artificially created cavity at the active site of cytochrome… · DMI A295 · binds HIS175, LEU177, GLY178, LYS179, THR180, GLY189, PRO190, GLY191 and 4 more

Residues it binds most

GLY 4, LEU 4, MET 4, ASP 4, HIS 4, LYS 4, PRO 4, THR 4, CYS 1, GLU 1 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • CL · Chloride ion
  • GOL · Glycerol

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