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Ligand · DLL

DLL · 5'-O-[hydroxy(phenylacetyl)phosphoryl]adenosine

DLL, 5'-O-[hydroxy(phenylacetyl)phosphoryl]adenosine (C18 H20 N5 O8 P, 465.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
DLL
Formula
C18 H20 N5 O8 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

DLL in 4 structures; the first of them:

  • 2Y4N · PaaK1 in complex with phenylacetyl adenylate · DLL A505 · binds TYR136, PHE141, THR142, GLY143, PHE212, GLY213, ALA214, GLU215 and 16 more
  • 2Y4O · Crystal Structure of PaaK2 in complex with phenylacetyl adenylate · DLL A1441 · binds SER97, PHE140, PHE145, THR146, GLY147, PHE216, GLY217, ALA218 and 17 more
  • 2Y4N · PAAK1 in complex with phenylacetyl adenylate · DLL A505 · binds TYR136, PHE141, THR142, GLY143, PHE212, GLY213, ALA214, GLU215 and 16 more
  • 2Y4O · Crystal structure of PAAK2 in complex with phenylacetyl adenylate · DLL A1441 · binds SER97, PHE140, PHE145, THR146, GLY147, PHE216, GLY217, ALA218 and 17 more

Residues it binds most

GLY 8, ILE 8, PHE 8, ASP 8, GLU 8, PRO 8, THR 8, SER 8, TYR 8, ALA 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • BME · Beta-mercaptoethanol
  • PEG · Di(hydroxyethyl)ether
  • PAC · 2-phenylacetic acid
  • K · Potassium ion
  • PGE · Triethylene glycol

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