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Ligand · DL2

DL2 · 5-chloranyl-2-(2-oxidanylidene-2-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethyl)-3~{H}-pyridin-6-one

DL2, 5-chloranyl-2-(2-oxidanylidene-2-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethyl)-3~{H}-pyridin-6-one (C18 H17 Cl N2 O4, 360.8 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
DL2
Formula
C18 H17 Cl N2 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

DL2 in 2 structures; the first of them:

  • 6FKD · Crystal structure of N2C/D282C stabilized opsin bound to RS16 · DL2 A412 · binds GLU122, LEU125, TYR191, VAL204, MET207, PHE208, HIS211, PHE212 and 7 more
  • 6FKD · Crystal structure of N2C/D282C stabilized opsin bound to RS16 · DL2 A412 · binds GLU122, LEU125, TYR191, VAL204, MET207, PHE208, HIS211, PHE212 and 6 more

Residues it binds most

PHE 2, MET 2, TYR 2, ALA 2, CYS 2, GLU 2, HIS 2, LEU 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • PLM · Palmitic acid
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • BOG · octyl beta-D-glucopyranoside
  • ACE · Acetyl group

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