Ligand · DK8

DK8 · 2-[(2~{E},6~{E},10~{Z},14~{E},18~{E},22~{E},26~{E})-3, 7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14, 18,22,26,30-octaenyl]naphthalene-1,4-dione

DK8, 2-[(2~{E},6~{E},10~{Z},14~{E},18~{E},22~{E},26~{E})-3, 7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14, 18,22,26,30-octaenyl]naphthalene-1,4-dione (C50 H70 O2, 703.1 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record…

Component: DK8
Formula: C50 H70 O2
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

DK8 in 1 structure; the first of them:

7OY2 · High resolution structure of cytochrome bd-II oxidase from E. COLI · DK8 B402 · binds TRP12, GLY16, LEU19, PHE22, MET23, LEU64, LEU71, TRP75 and 29 more

Residues it binds most

LEU 1, PHE 1, ALA 1, GLY 1, MET 1, TRP 1, VAL 1, THR 1, CYS 1, ILE 1 (residue and the binding sites it lines).

Found with

CDN · Cardiolipin
HDD · Cis-heme D hydroxychlorin gamma-spirolactone
HEB · Heme B/C
POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
OXY · Oxygen molecule

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