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Ligand · DEG

DEG · butyl alpha-D-mannopyranoside

DEG, butyl alpha-D-mannopyranoside (C10 H20 O6, 236.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
DEG
Formula
C10 H20 O6
Class
sugar
Structures
4
PDB entries
2

Binding sites

DEG in 4 structures; the first of them:

  • 1TR7 · FimH adhesin receptor binding domain from uropathogenic E. coli · DEG B502 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 1UWF · 1.7 A resolution structure of the receptor binding domain of the FimH adhesin from… · DEG A1159 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 1TR7 · Fimh adhesin receptor binding domain from uropathogenic E. COLI · DEG B502 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 1UWF · 1.7 a resolution structure of the receptor binding domain of the fimh adhesin from… · DEG A1159 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more

Residues it binds most

ASP 6, ASN 6, ILE 6, PHE 6, TYR 6, GLN 6 (residue and the binding sites it lines).

Found with

  • CAC · Cacodylate ion
  • GOL · Glycerol
  • MPD · (4S)-2-methyl-2,4-pentanediol

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