Ligand · DEB
DEB · 6-deoxyerythronolide B
DEB, 6-deoxyerythronolide B (C21 H38 O6, 386.5 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- DEB
- Formula
- C21 H38 O6
- Class
- ligand
- Structures
- 6
- PDB entries
- 6
Binding sites
DEB in 6 structures; the first of them:
- 5MNS · Structural and functional characterization of olep in complex with 6DEB in sodium formate · DEB A502 · binds PHE84, LEU94, LEU179, ILE243, ALA244, THR248, VAL291, SER295 and 3 more
- 5MNV · Structural and functional characterization of olep in complex with 6DEB in peg · DEB A502 · binds MET83, PHE84, LEU94, ILE243, ALA244, VAL291, GLY294, SER295 and 2 more
- 6ZI3 · Crystal structure of olep-6DEB bound to L-rhamnose · DEB A502 · binds MET83, PHE84, LEU94, MET178, LEU179, ILE243, ALA244, THR248 and 4 more
- 7Q6R · Olep mutant E89Y in complex with 6DEB · DEB A502 · binds MET83, PHE84, LEU94, MET178, LEU179, ILE243, ALA244, THR248 and 4 more
- 7Q6X · Olep mutant S240Y in complex with 6DEB · DEB A502 · binds MET83, PHE84, LEU94, MET178, LEU179, TYR240, ILE243, ALA244 and 6 more
- 7Q89 · Olep mutant G92W in complex with 6DEB · DEB A502 · binds MET83, PHE84, TRP92, LEU94, MET178, LEU179, SER240, ILE243 and 7 more
Residues it binds most
LEU 39, PHE 39, ILE 38, MET 34, SER 37, ALA 37, THR 34, VAL 27, TRP 6, GLY 5 (residue and the binding sites it lines).
Found with
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