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Ligand · DBM

DBM · 9-(6-deoxy-beta-D-allofuranosyl)-6-methylpurine

DBM, 9-(6-deoxy-beta-D-allofuranosyl)-6-methylpurine (C12 H16 N4 O4, 280.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
DBM
Formula
C12 H16 N4 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

DBM in 2 structures; the first of them:

  • 1OV6 · M64V pnp + allo · DBM A245 · binds ARG87, SER90, CYS91, GLY92, ALA156, PHE159, PHE167, VAL178 and 6 more
  • 1OV6 · M64V pnp + allo · DBM A245 · binds ARG87, SER90, CYS91, GLY92, ALA156, PHE159, PHE167, VAL178 and 6 more

Residues it binds most

PHE 6, GLU 6, SER 6, ALA 6, ARG 6, CYS 6, GLY 6, ILE 6, MET 6, VAL 6 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion

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