Ligand · DAL
DAL · D-alanine
DAL, D-alanine (C3 H7 N O2, 89.1 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (10 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- DAL
- Formula
- C3 H7 N O2
- Class
- ligand
- Structures
- 10
- PDB entries
- 10
Binding sites
DAL in 10 structures; the first of them:
- 5ZHW · VanYB in complex with D-Alanine-D-Alanine · DAL A302 · binds ARG146, GLN151, TRP179, VAL180, ALA181, SER186, GLU187, HIS188 and 4 more
- 6CSF · Crystal structure of sodium/alanine symporter AgcS with D-alanine bound · DAL M502 · binds ALA74, THR75, ILE76, GLY77, THR78, GLY79, ASN80, ILE165 and 6 more
- 6D66 · Crystal structure of the human dual specificity 1 catalytic domain (C258S) as a maltose… · DAL B204 · binds ARG31, VAL65, TYR69
- 6G7N · Trichodesmium Tery_3377 (IdiA) (FutA) with iron and alanine ligand. · DAL A401 · binds SER11, ARG12, TYR14, VAL61, ARG104, TYR144, TYR200, TYR201 and 1 more
- 6LL9 · Crystal structure of D-alanine-D-alanine ligase from Aeromonas hydrophila · DAL A400 · binds ARG278, GLY299, ILE303, SER304, MET305
- 6U83 · OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4 · DAL A403 · binds ALA284, TYR285, ASP286, ALA319, SER320, GLN321, GLY322, ASN332 and 3 more
- 7R27 · Crystal structure of the L. plantarum D-alanine ligase DltA · DAL A701 · binds ASP198, CYS270, GLY271, GLY296, PRO297, THR298, VAL302
- 7RJJ · Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein… · DAL A601 · binds ASP440, THR441, GLY442, THR475, ASP476, VAL478, ASN484, LEU487 and 2 more
- 7UO3 · Co-crystal structure of Salmonella Typhimurium Tlde1a in complex with D-alanine · DAL A901 · binds PRO39, ASP40, ARG115, GLY116, HIS129, GLY130, HIS301, HIS302 and 1 more
- 8PXZ · Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex… · DAL A502 · binds THR320, TRP340, JGO2
Residues it binds most
ARG 12, VAL 12, GLY 9, HIS 5, ASP 9, THR 7, GLU 6, SER 8, TYR 5, TRP 5 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.