GL1X · GenesisL1 explorer

Ligand · D9X

D9X · (2s,7r,7ar,13ap,16z,18e,20s,21s,22r,23r,24r,25s,26r, 27S,28E)-5,21,23-trihydroxy-27-methoxy-2,4,16,20,22, 24,26-heptamethyl-10-[4-(2-methylpropyl)piperazin-1-yl]-12-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1, 6,15-trioxo-1,2,7,7A-tetrahydro-6H-2,7-(epoxypentadeca[1,11,13]trienoimino)[1]benzofuro[4,5-a]phenoxazin-25-yl acetate

D9X, (2s,7r,7ar,13ap,16z,18e,20s,21s,22r,23r,24r,25s,26r, 27S,28E)-5,21,23-trihydroxy-27-methoxy-2,4,16,20,22, 24,26-heptamethyl-10-[4-(2-methylpropyl)piperazin-1-yl]-12-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1…

Component
D9X
Formula
C63 H81 N5 O14
Class
ligand
Structures
1
PDB entries
1

Binding sites

D9X in 1 structure; the first of them:

  • 7SZK · Cryo-EM structure of 27A bound to E. COLI rnap and RRNBP1 promoter complex · D9X C3001 · binds SER509, GLN510, SER512, GLN513, PHE514, HIS526, ARG529, SER531 and 6 more

Residues it binds most

ARG 1, SER 1, GLN 1, ASN 1, GLY 1, HIS 1, ILE 1, LEU 1, PHE 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion

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