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Ligand · D8T

D8T · D-arabinonic acid

D8T, D-arabinonic acid (C5 H10 O6, 166.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
D8T
Formula
C5 H10 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

D8T in 2 structures; the first of them:

  • 3SBF · Crystal structure of the mutant P311A of enolase superfamily member from VIBRIONALES… · D8T A404 · binds HIS128, ASP207, HIS209, GLU233, GLU259, ARG280, HIS309, CYS310 and 5 more
  • 3SBF · Crystal structure of the mutant P311A of enolase superfamily member from vibrionales… · D8T A404 · binds HIS128, ASP207, HIS209, GLU233, GLU259, ARG280, HIS309, CYS310 and 5 more

Residues it binds most

GLU 8, HIS 8, ARG 8, ASP 8, ALA 8, TRP 8, TYR 8, CYS 6 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid

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